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1. gsk.com
End to end drug discovery project management using a
knowledge graph
Saqib Mir –Engineering Lead, R&D Tech

2. 2
•Pain points of drug discovery project management
•Overview of our solution: Atlas
•Why graph and Neo4j
•Outcomes / value additions by Atlas
Outline

3. 3
•For research projects, no central environment for:
-Capturingnarratives,evidenceandknowledge
-Difficultyinsharing cross-project learnings
-Tracking
-Difficult and laborious cross-projectcomparison
-Identifying opportunities for acceleration
-Governance
-Inability to link and trace data, analysis and interpretations supporting project specific claims
-Time-consuming, inefficient preparation and duplication for team and governance meetings: Ad hoc
reports, proliferation of PowerPoint files
The Problem
A non-exhaustive list of pain points

4. 4
Our Solution: Atlas
A central knowledge and decision-making platform for GSK projects
Project knowledge in one place easily searchable for
cross functional / project teamsharing facilitating
building of scientific andtechnical learning.
Total transparency of scientific and technical
projectdata with real time visuals..Earlier
identification of technical chances of success or
failure.
Senior leaders | Project teams | Functional Scientists
able to view project information in a single virtual
environment.. Increased efficiency | Reduction in
duplication of information for different stakeholders
and auto generation of components of the TED
Digital transformation of R&D
Consistent representation | Auto generation of data
plots usingreal time information.
Enabling data driven decision making,earlier identification of technical success factors
and risks. Improved portfolio technical health accelerating development of medicines for
patients

5. 5
Atlas: Project and Target Safety Review narratives
Question Based Approach

6. 6
Atlas: Indication Evaluation Framework
Evaluating secondary indications for a target/asset

7. 09 December 2022 7
Atlas: Translational Table
Measuring how translatable our science will be in the clinic

8. 8
Atlas: Generating reports and documents
Executive summaries, governance documents, status reports, data integrity
documents

9. 9
Atlas: Generating reports and documents
Executive summaries, governance documents, status reports, data integrity
documents

10. 10
Atlas: Portfolio views
Health status of a whole portfolio of projects

11. 11
Obligatory (simplified) schema!

12. 12
Simplified Architecture
Neo4J
Postgres
REST API
API Gateway
GSK SSO
Micro UIs
DataKitchen
DataOps
Source
Systems
Azure ADLS
/ Blob
Scientific
Search
Denodo

13. 13
•Atlas started piecemeal –with a vague scope
-Flexibleschema with the need to extend quickly
•Future state as a knowledge store
-Automaticallyextractand store knowledge from experiments, internal databases, literature,
historical projects etc.
-Offerthisaspossibleevidence for project narratives -automate this process!
-Helpmakecertaindecisions(recommendations) at the project and portfolio levels
•Why Neo4j
-Notechnicaldebt
-Performance
Why a graph?
And why Neo4j?

14. 14
•Prompting to think earlier about critical project aspects
•Interrogation of scientific strengths, risks and gaps
•Transparency and traceability of scientific interpretations and links to data to support
decision making
•Insights from visualisations to identify acceleration opportunities
•Ability to link data, analysis and interpretations
•Efficient preparation for teams and governance
•Efficient digital process for evaluating secondary indications
Outcomes: Addressing key pain points to improve efficiency
Value Added by Atlas

15. Thank you
Questions/comments