Equine Coat Color Genetics

An Infographic from ANS415 Equine Systems Management at Iowa State University

1. Equine Coat
Color Genetics
Genetics Terms Types of Pigments
Dominant: one allele will overshadow the other
Recessive: one allele cannot overshadow the other
Homozygous: two of the same alleles at a locus
Heterozygous: two different alleles at a locus
Melanin: black or brown color
Pheomelanin: red or yellow color
Basic
Genetics
Appearance
determined by genes
at specific locations
(loci)
Alleles are
alternate
forms of genes
Each gene
has two
alleles at a
locus
Equine Coat Colors
The Base Colors
Dilution Genes
White Patterns
Article Cited: Julie Ann Luiz Adrian DVM (2013) Equine Color Genetics and
Deoxyribonucleic Acid Testing. J Veterinar Sci Technol 4: 134.
Infographic Design and Artwork: Nicole Lehman
Genetic Testing
Black Bay Chestnut
Bay Buckskin
Perlino
Cremello Palomino Chestnut
Overo Tobiano Sabino
Extension (E)
Locus controls
Agouti (A)
Locus controls
even
distribution of
black color
limitation of
black color
distribution
Extension and Agouti Loci
work together to form
three
major
coat
colors
Dominant: E
Recessive: e
Dominant: A
Recessive: a
EE or Ee =
black or brown
ee = chestnut
AA or Aa = bay
or chestnut
aa = black
so E_aa E_A_ ee_ _
* Note: underscore (_) indicates that either allele may be present in the phenotype
Gray
Locus
horse born
non-gray
and grays
with age
Dominant: G
Recessive: g
G_ = gray
gg = base color
White
Locus
horse born
without
skin
pigment
Dominant: W
Recessive: w
WW = lethal
Ww = white
ww = base color
Cream Locus
Lightens base color
CC = no
dilution
CCr = single
dilution
CrCr =
double
dilution
Common Examples
Bay
(CC)
Buckskin
(CCr)
Palomino
(CCr)
Chestnut
(CC)
Perlino
(CrCr)
Cremello
(CrCr)
May also occur in black horses
Dun
Locus
Lightens
body; has
dark leg
barring and
dorsal stripe
Dominant: Dn
Recessive: dn
Dn_ = dun
dndn = base color
Silver
Locus
Mottled
silver color
often seen
in gray
horses
Dominant: Z or
SILV
Recessive: z or
silv
Z_ = dapple
zz = base color
Newly -
Discovered
Dilution
Genes
Pearl: light skin and teal eyes,
Prl_ = pearl, prlprl = base color

Champagne: bronze shade with carroty spots,
Ch_ = champagne, chch = base color
Paint Color Patterns
splash white over base colors
Three
major
types
Overo Tobiano Sabino
Color
over top
White
over top
Mix of paint
and roan
Dominant: O
Recessive: o
Dominant: TO
Recessive: to
Dominant: Sb
Recessive: sb
O_ = overo
oo = base
color
TO_ = tobiano
toto = base
color
Sb_ = sabino
sbsb = base
color
Leopard
Complex
Appaloosa
color pattern:
varied levels
of white
spotting over
base color
Dominant: Lp
Recessive: lp
Lp_= appaloosa
lplp = base color
Roan
Locus
White and
based colored
hair intermixed,
occurs on all
base colors and
dilutions
Dominant: Rn
Recessive: rn
Rn_= roan
rnrn = base color
Uses:
•Reduces guesswork in breeding
•DNA-typing
•Parentage tests
•Check for genetic disorders
•Especially Overo Lethal White
Syndrome (OO genotype linked to
lethal WW genotype)