Glaucoma
From genetics to proteomics
Published Online: December 15, 2016 - http://dx.doi.org/10.1016/j.cels.2016.11.006
Network analysis revealed 16 modules of co-expressed proteins, 10 of which correlated with AD
phenotypes This multi-network analysis reveals protein- and disease-specific pathways
involved in the etiology, initiation, and progression of AD.
Semba and Enghild (2014): “In the post-genomic era, recent advances in protein chemistry,
mass spectrometry, and bioinformatics are bringing a rapid and fundamental transformation to
biological and medical research. In humans, 20,000 protein-coding genes give rise to
∼
100,000 proteins and an estimated 1 million different protein modified forms (
∼
Hood et al. 2012).
The proteome, which consists of all proteins expressed in a cell, tissue, or organism, is the
basic link between the genome and phenotypes of health and disease. “
Human Proteome Project with high-quality analyses of the proteomes of these
compartments of the human eye : retina, iris, ciliary body, retinal pigment
epithelium/choroid, retrobulbar optic nerve, and sclera, with 3436, 2929, 2867, 2755, 2711, and
1945 proteins, respectively. These proteomics resources represent a useful starting point for a
broad range of research aimed at developing preventive and therapeutic interventions for the
various causes of blindness.
Proteomics studies toward molecular mechanisms and biomarkers of glaucoma. A number of studies of human
glaucoma and in vitro and in vivo experimental models have used proteomics analysis techniques. Distinct proteomics
techniques have been applied to analyze diverse sample types, including optic nerve, retina, sclera, trabecular
meshwork, aqueous humor, pseudoexfoliative material, tear, and blood. Ocular samples included tissue lysates unless
indicated otherwise, such as cell cultures or enriched samples of RGCs or astrocytes. Blood samples included whole
serum, IgG elutes, or isolated leukocytes. *indicates the studies including human samples. Proteomics analysis of
glaucoma has resulted in the lists of differentially expressed proteins and contributed to current understanding of
molecular mechanisms and biomarkers of glaucoma.