Tools and database of NCBI

Ncbi
Ncbi tools
Ncbi database
Blast

1. Subject:-computational Biology
Presentation on
Supervised by-
Dr. BibhuduttaMishra
Presented by-IPSITA SAHOO
Reg. no-200705180160

2. CONTENTS
NCBI
•Home page
•About
Tools and database of NCBI
•BLAST
•Types of BLAST
•Home page
•Databases
References

3. NCBIstandsfor“NationalCenterfor
BiotechnologyInformation”
ItispartoftheUnitedStatesNationalLibraryof
Medicine(NLM),abranchoftheNationalInstitutes
ofHealth(NIH).
Itisapprovedandfundedbythegovernmentof
theUnitedStates.
TheNCBIislocatedinBethesda,Marylandand
wasfoundedin1988throughlegislationsponsored
byUSCongressmanClaudePepper.
TheNCBIhousesaseriesofdatabasesrelevant
tobiotechnologyandbiomedicineandisan
importantresourceforbioinformaticstoolsand
services.
MajordatabasesincludeGenBankforDNA
sequencesandPubMed,abibliographicdatabasefor
biomedicalliterature.Otherdatabasesinclude
theNCBIEpigenomicsdatabase.Allthesedatabases
areavailableonlinethroughtheEntrezsearch
engine.
NCBI

4. Home page of NCBI

6. Tools and Databases of NCBI

9. Home page of BLAST

10. Nucleotidedatabase-
TheNucleotidesequencedatabaseisacollectionofsequencesfromGenBank,RefSeq,
andThirdPartyAnnotation(TPA).Genome,geneandtranscriptsequencedataprovide
thefoundationforbiomedicalresearchanddiscovery.
Proteinsequencedatabase-
TheProteinsequencedatabaseisacollectionofdatafromseveralsources,including
translationsfromannotatedcodingregionsinGenBank,RefSeqandTPA,aswellas
recordsfromSwissProt,PIR,PRF,andPDB.
Structuraldatabases-
Structuraldatabasesareessentialtoolsforallcrystallographicworkandoftenneedtobe
consultedatseveralstagesoftheprocessofproducing,solving,refiningandpublishing
thestructureofanewmaterial.
OMIM-OnlineMendelianInheritanceinMan-
OMIMisacomprehensive,authoritativecompendiumofhumangenesandgenetic
phenotypesthatisfreelyavailableandupdateddaily.OMIMisauthoredandeditedatthe
McKusick-NathansInstituteofGeneticMedicine,JohnsHopkinsUniversitySchoolof
Medicine,underthedirectionofDr.AdaHamosh.Itsofficialhomeisomim.org.
Some databases of NCBI

11. My subject teacher: Mr. BibhuduttaMishra
Dr. YashaswiNayak, HoDand Dean SoAS
All the Faculty members of Department of Zoology, School of
Applied sciences, CUTM
Family and friends
Acknowledgements
Reference
National Center for Biotechnology Information (US). (2013).The NCBI
handbook. National Center for Biotechnology Information (US).